STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wapA_3tRNA(Glu)-specific nuclease WapA precursor. (324 aa)    
Predicted Functional Partners:
AQR98998.1
Hypothetical protein.
  
 
 
 0.657
AQR99007.1
Hypothetical protein.
  
     0.634
AQS01336.1
Hypothetical protein.
  
   
 0.626
AQR99019.1
Hypothetical protein.
 
     0.605
AQR99003.1
Hypothetical protein.
 
     0.598
AQS01342.1
Hypothetical protein.
 
     0.593
AQR99020.1
Phage late control protein Gpd.
  
     0.580
AQR98971.1
Hypothetical protein.
  
   
 0.576
AQR98973.1
Hypothetical protein.
  
   
 0.571
AQS01819.1
Phage late control protein Gpd.
  
     0.566
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.