STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wapA_3tRNA(Glu)-specific nuclease WapA precursor. (324 aa)    
Predicted Functional Partners:
AQR98998.1
Hypothetical protein.
  
 
 
 0.662
AQR99007.1
Hypothetical protein.
  
     0.634
AQS00331.1
Ankyrin repeat protein.
   
 
 0.626
AQS02085.1
Hypothetical protein.
   
 
 0.626
AQS01336.1
Hypothetical protein.
  
     0.621
AQR99019.1
Hypothetical protein.
 
     0.609
AQR99003.1
Hypothetical protein.
 
     0.601
AQS01342.1
Hypothetical protein.
 
     0.596
AQR99020.1
Phage late control protein Gpd.
 
     0.580
AQR98971.1
Hypothetical protein.
 
     0.569
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.