Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
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[Homology]
Score
pyrK_1Dihydroorotate dehydrogenase B, electron transfer subunit. (296 aa)    
Predicted Functional Partners:
gltD_1
Glutamate synthase [NADPH] small chain.
 
 
 0.994
gltD_5
Glutamate synthase [NADPH] small chain.
 
 
 0.977
gltD_2
Glutamate synthase [NADPH] small chain.
 
 
 0.976
pyrD
Dihydroorotate dehydrogenase B, catalytic subunit; Catalyzes the conversion of dihydroorotate to orotate.
 
 
 0.907
gltD_4
Glutamate synthase [NADPH] small chain.
 
 
 0.863
gltD_3
Glutamate synthase [NADPH] small chain.
 
 
 0.856
carB
Carbamoyl-phosphate synthase large chain; Belongs to the CarB family.
  
 
 0.696
pyrE
Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).
  
  
 0.695
pyrF
Orotidine 5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family. Type 2 subfamily.
  
  
 0.694
pyrB
Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
  
  
 0.687
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
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