STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
mrrMrr restriction system protein. (247 aa)    
Predicted Functional Partners:
AQR99074.1
Hypothetical protein.
     0.992
mii
3-methylitaconate isomerase.
   
  
 0.758
AQR99076.1
Hypothetical protein.
       0.605
padI
NADH-dependent phenylglyoxylate dehydrogenase subunit beta.
   
    0.602
dmsB
Anaerobic dimethyl sulfoxide reductase chain B.
   
    0.602
hsdR_1
Type-1 restriction enzyme R protein.
 
  
 0.569
HsdM
Putative type I restriction enzymeP M protein.
 
  
 0.514
hsdM
Type I restriction enzyme EcoKI M protein.
 
  
 0.486
AQR99094.1
Putative type I restriction enzymeP M protein.
 
  
 0.462
prmC_2
Release factor glutamine methyltransferase.
 
  
 0.452
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.