STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQR99110.1Hypothetical protein. (95 aa)    
Predicted Functional Partners:
polA_1
DNA polymerase I, thermostable.
 
     0.899
AQR99107.1
Hypothetical protein.
 
     0.892
AQR99104.1
Hypothetical protein.
 
   
 0.883
AQR99105.1
Hypothetical protein.
 
   
 0.882
AQR99106.1
Hypothetical protein.
 
     0.881
AQR99109.1
Phage antirepressor protein KilAC domain protein.
 
     0.875
AQR99099.1
Chromosome segregation protein.
 
 
 0.751
AQR99098.1
Hypothetical protein.
 
     0.714
AQR99101.1
Hypothetical protein.
 
     0.663
AQR99102.1
Hypothetical protein.
 
     0.646
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.