Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AQR99114.1Hypothetical protein. (137 aa)    
Predicted Functional Partners:
AQR99113.1
Putative AAA-ATPase.
     0.994
AQS00129.1
Hypothetical protein.
  
    0.740
dnaC_3
Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.
  
 
 0.720
AQR99847.1
Hypothetical protein.
  
    0.709
AQR99849.1
Hypothetical protein.
  
    0.693
AQR99705.1
Bacterial SH3 domain protein.
  
     0.553
MoaF
Molybdenum cofactor biosynthesis protein F.
       0.462
PilO
Hypothetical protein.
  
     0.429
AQS02249.1
PD-(D/E)XK nuclease family transposase.
  
     0.420
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
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