STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQR99121.1Putative transposase. (386 aa)    
Predicted Functional Partners:
AQR99120.1
Hypothetical protein; Resolvase, N terminal domain.
  
 0.948
AQS00683.1
Hypothetical protein; Resolvase, N terminal domain.
  
 0.778
tnsC
Transposon Tn7 transposition protein TnsC.
    
   0.604
AQR99166.1
Hypothetical protein.
    
   0.584
tnsB
Transposon Tn7 transposition protein TnsB.
    
   0.584
AQR99119.1
Hypothetical protein.
       0.543
AQR99122.1
Hypothetical protein.
       0.465
AQR99123.1
Hypothetical protein.
       0.465
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.