Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AQR99912.1 | lon_1 | CSACC_17210 | CSACC_10580 | Rubrerythrin. | Lon protease. | 0.414 |
| AQR99912.1 | tepA | CSACC_17210 | CSACC_14460 | Rubrerythrin. | Translocation-enhancing protein TepA. | 0.404 |
| lon_1 | AQR99912.1 | CSACC_10580 | CSACC_17210 | Lon protease. | Rubrerythrin. | 0.414 |
| lon_1 | mnmG_1 | CSACC_10580 | CSACC_26270 | Lon protease. | tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG. | 0.418 |
| lon_1 | sigF_1 | CSACC_10580 | CSACC_10610 | Lon protease. | RNA polymerase sigma-F factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.619 |
| lon_1 | spoIIAA | CSACC_10580 | CSACC_10590 | Lon protease. | Anti-sigma F factor antagonist; Belongs to the anti-sigma-factor antagonist family. | 0.642 |
| lon_1 | spoIIAB_1 | CSACC_10580 | CSACC_10600 | Lon protease. | Anti-sigma F factor; Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition. | 0.623 |
| lon_1 | tepA | CSACC_10580 | CSACC_14460 | Lon protease. | Translocation-enhancing protein TepA. | 0.412 |
| lon_1 | ugtP_1 | CSACC_10580 | CSACC_04920 | Lon protease. | Processive diacylglycerol beta-glucosyltransferase. | 0.422 |
| mnmG_1 | lon_1 | CSACC_26270 | CSACC_10580 | tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG. | Lon protease. | 0.418 |
| mnmG_1 | ugtP_1 | CSACC_26270 | CSACC_04920 | tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG. | Processive diacylglycerol beta-glucosyltransferase. | 0.462 |
| sigF_1 | lon_1 | CSACC_10610 | CSACC_10580 | RNA polymerase sigma-F factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Lon protease. | 0.619 |
| sigF_1 | spoIIAA | CSACC_10610 | CSACC_10590 | RNA polymerase sigma-F factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Anti-sigma F factor antagonist; Belongs to the anti-sigma-factor antagonist family. | 0.974 |
| sigF_1 | spoIIAB_1 | CSACC_10610 | CSACC_10600 | RNA polymerase sigma-F factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Anti-sigma F factor; Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition. | 0.992 |
| sigF_1 | tepA | CSACC_10610 | CSACC_14460 | RNA polymerase sigma-F factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Translocation-enhancing protein TepA. | 0.419 |
| spoIIAA | lon_1 | CSACC_10590 | CSACC_10580 | Anti-sigma F factor antagonist; Belongs to the anti-sigma-factor antagonist family. | Lon protease. | 0.642 |
| spoIIAA | sigF_1 | CSACC_10590 | CSACC_10610 | Anti-sigma F factor antagonist; Belongs to the anti-sigma-factor antagonist family. | RNA polymerase sigma-F factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.974 |
| spoIIAA | spoIIAB_1 | CSACC_10590 | CSACC_10600 | Anti-sigma F factor antagonist; Belongs to the anti-sigma-factor antagonist family. | Anti-sigma F factor; Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition. | 0.999 |
| spoIIAB_1 | lon_1 | CSACC_10600 | CSACC_10580 | Anti-sigma F factor; Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition. | Lon protease. | 0.623 |
| spoIIAB_1 | sigF_1 | CSACC_10600 | CSACC_10610 | Anti-sigma F factor; Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition. | RNA polymerase sigma-F factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.992 |
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