Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| YqfC | YqfD | CSACC_10880 | CSACC_10890 | YabP family protein. | Putative stage IV sporulation protein YqfD. | 0.994 |
| YqfC | dgkA | CSACC_10880 | CSACC_10920 | YabP family protein. | Undecaprenol kinase. | 0.601 |
| YqfC | era_2 | CSACC_10880 | CSACC_10930 | YabP family protein. | GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.518 |
| YqfC | rny_3 | CSACC_10880 | CSACC_10900 | YabP family protein. | Ribonuclease Y. | 0.814 |
| YqfC | ybeY | CSACC_10880 | CSACC_10910 | YabP family protein. | Endoribonuclease YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.780 |
| YqfD | YqfC | CSACC_10890 | CSACC_10880 | Putative stage IV sporulation protein YqfD. | YabP family protein. | 0.994 |
| YqfD | dgkA | CSACC_10890 | CSACC_10920 | Putative stage IV sporulation protein YqfD. | Undecaprenol kinase. | 0.601 |
| YqfD | era_2 | CSACC_10890 | CSACC_10930 | Putative stage IV sporulation protein YqfD. | GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.518 |
| YqfD | rny_3 | CSACC_10890 | CSACC_10900 | Putative stage IV sporulation protein YqfD. | Ribonuclease Y. | 0.780 |
| YqfD | ybeY | CSACC_10890 | CSACC_10910 | Putative stage IV sporulation protein YqfD. | Endoribonuclease YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.780 |
| cdd | era_2 | CSACC_38460 | CSACC_10930 | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.744 |
| cdd | ybeY | CSACC_38460 | CSACC_10910 | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | Endoribonuclease YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.913 |
| dgkA | YqfC | CSACC_10920 | CSACC_10880 | Undecaprenol kinase. | YabP family protein. | 0.601 |
| dgkA | YqfD | CSACC_10920 | CSACC_10890 | Undecaprenol kinase. | Putative stage IV sporulation protein YqfD. | 0.601 |
| dgkA | era_2 | CSACC_10920 | CSACC_10930 | Undecaprenol kinase. | GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.778 |
| dgkA | ribBA | CSACC_10920 | CSACC_14600 | Undecaprenol kinase. | Riboflavin biosynthesis protein RibBA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.448 |
| dgkA | rny_3 | CSACC_10920 | CSACC_10900 | Undecaprenol kinase. | Ribonuclease Y. | 0.739 |
| dgkA | ybeY | CSACC_10920 | CSACC_10910 | Undecaprenol kinase. | Endoribonuclease YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.964 |
| era_2 | YqfC | CSACC_10930 | CSACC_10880 | GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | YabP family protein. | 0.518 |
| era_2 | YqfD | CSACC_10930 | CSACC_10890 | GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | Putative stage IV sporulation protein YqfD. | 0.518 |
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