STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lysN_12-aminoadipate transaminase. (476 aa)    
Predicted Functional Partners:
AQR99330.1
Nucleotidyltransferase domain protein.
       0.838
yigZ
IMPACT family member YigZ.
 
    0.743
AQR99296.1
Putative GTP cyclohydrolase 1 type 2.
  
    0.699
AQR99333.1
Putative transcriptional regulatory protein.
       0.586
rsxB_2
Electron transport complex subunit RsxB.
    
   0.570
rsxB_5
Electron transport complex subunit RsxB.
    
   0.570
ndhI
NAD(P)H-quinone oxidoreductase subunit I.
    
   0.570
hflX
GTPase HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis.
     
 0.568
AQR99329.1
Hypothetical protein.
       0.509
hpt_2
Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.
       0.494
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.