ycdT_1 protein (Clostridium saccharobutylicum)

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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Score

ycdT_1

Putative diguanylate cyclase YcdT. (258 aa)

Predicted Functional Partners:

cph2_3

0.874

dosP

0.869

pleD_4

0.774

rpfG_9

0.743

rpfG_11

0.742

rpfG_2

0.741

rpfG_3

0.735

rpfG_7

0.730

barA_2

0.716

AQS00084.1

0.708

Your Current Organism:

Clostridium saccharobutylicum

NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AQS00084.1	barA_2	CSACC_19000	CSACC_22060	Putative histidine kinase sensor domain protein.	Signal transduction histidine-protein kinase BarA.	0.969
AQS00084.1	cph2_3	CSACC_19000	CSACC_39930	Putative histidine kinase sensor domain protein.	Phytochrome-like protein cph2.	0.967
AQS00084.1	dosP	CSACC_19000	CSACC_40620	Putative histidine kinase sensor domain protein.	Oxygen sensor protein DosP.	0.989
AQS00084.1	pleD_4	CSACC_19000	CSACC_32390	Putative histidine kinase sensor domain protein.	Response regulator PleD.	0.708
AQS00084.1	ycdT_1	CSACC_19000	CSACC_11530	Putative histidine kinase sensor domain protein.	Putative diguanylate cyclase YcdT.	0.708
barA_2	AQS00084.1	CSACC_22060	CSACC_19000	Signal transduction histidine-protein kinase BarA.	Putative histidine kinase sensor domain protein.	0.969
barA_2	cph2_3	CSACC_22060	CSACC_39930	Signal transduction histidine-protein kinase BarA.	Phytochrome-like protein cph2.	0.972
barA_2	dosP	CSACC_22060	CSACC_40620	Signal transduction histidine-protein kinase BarA.	Oxygen sensor protein DosP.	0.989
barA_2	pleD_4	CSACC_22060	CSACC_32390	Signal transduction histidine-protein kinase BarA.	Response regulator PleD.	0.712
barA_2	ycdT_1	CSACC_22060	CSACC_11530	Signal transduction histidine-protein kinase BarA.	Putative diguanylate cyclase YcdT.	0.716
cph2_3	AQS00084.1	CSACC_39930	CSACC_19000	Phytochrome-like protein cph2.	Putative histidine kinase sensor domain protein.	0.967
cph2_3	barA_2	CSACC_39930	CSACC_22060	Phytochrome-like protein cph2.	Signal transduction histidine-protein kinase BarA.	0.972
cph2_3	dosP	CSACC_39930	CSACC_40620	Phytochrome-like protein cph2.	Oxygen sensor protein DosP.	0.944
cph2_3	pleD_4	CSACC_39930	CSACC_32390	Phytochrome-like protein cph2.	Response regulator PleD.	0.631
cph2_3	rpfG_11	CSACC_39930	CSACC_38420	Phytochrome-like protein cph2.	Cyclic di-GMP phosphodiesterase response regulator RpfG.	0.702
cph2_3	rpfG_2	CSACC_39930	CSACC_15820	Phytochrome-like protein cph2.	Cyclic di-GMP phosphodiesterase response regulator RpfG.	0.712
cph2_3	rpfG_3	CSACC_39930	CSACC_16850	Phytochrome-like protein cph2.	Cyclic di-GMP phosphodiesterase response regulator RpfG.	0.672
cph2_3	rpfG_7	CSACC_39930	CSACC_31280	Phytochrome-like protein cph2.	Cyclic di-GMP phosphodiesterase response regulator RpfG.	0.683
cph2_3	rpfG_9	CSACC_39930	CSACC_32250	Phytochrome-like protein cph2.	Cyclic di-GMP phosphodiesterase response regulator RpfG.	0.682
cph2_3	ycdT_1	CSACC_39930	CSACC_11530	Phytochrome-like protein cph2.	Putative diguanylate cyclase YcdT.	0.874