Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
idnTGnt-II system L-idonate transporter. (428 aa)    
Predicted Functional Partners:
garK
Glycerate 2-kinase; Belongs to the glycerate kinase type-1 family.
 
  
 0.927
cdaR
Carbohydrate diacid regulator.
 
   
 0.851
fruA_3
PTS system fructose-specific EIIABC component.
     
 0.562
lsrK
Autoinducer 2 kinase LsrK.
  
  
 0.542
xylB
Xylulose kinase.
  
  
 0.542
fucK
L-fuculokinase.
  
  
 0.440
hisI
Histidine biosynthesis bifunctional protein HisIE; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP.
      
 0.420
ptsG_1
PTS system glucose-specific EIICBA component.
   
  
 0.406
bglF
PTS system beta-glucoside-specific EIIBCA component.
      
 0.406
sacX
Negative regulator of SacY activity.
      
 0.406
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
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