STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQR99467.1NMT1/THI5 like protein. (333 aa)    
Predicted Functional Partners:
ssuC_2
Putative aliphatic sulfonates transport permease protein SsuC.
 
  
 0.981
fbpC
Fe(3+) ions import ATP-binding protein FbpC.
 
  
 0.943
tauB
Taurine import ATP-binding protein TauB.
  
  
 0.585
ssuB
Aliphatic sulfonates import ATP-binding protein SsuB.
  
  
 0.585
ssuC_1
Putative aliphatic sulfonates transport permease protein SsuC.
  
  
 0.580
AQR99466.1
Hypothetical protein.
 
     0.554
ssuC_3
Putative aliphatic sulfonates transport permease protein SsuC.
  
  
 0.545
urdA
Urocanate reductase precursor.
  
  
 0.537
cysD
Sulfate adenylyltransferase subunit 2.
  
  
 0.461
cysN
Sulfate adenylyltransferase subunit 1; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
  
  
 0.450
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
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