Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AQR99530.1 | SpoIIGA | CSACC_13390 | CSACC_13360 | PRC-barrel domain protein. | Sporulation factor SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | 0.754 |
| AQR99530.1 | YqfC | CSACC_13390 | CSACC_10880 | PRC-barrel domain protein. | YabP family protein. | 0.636 |
| AQR99530.1 | YqfD | CSACC_13390 | CSACC_10890 | PRC-barrel domain protein. | Putative stage IV sporulation protein YqfD. | 0.643 |
| AQR99530.1 | nrdR | CSACC_13390 | CSACC_13400 | PRC-barrel domain protein. | Transcriptional repressor NrdR; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family. | 0.718 |
| AQR99530.1 | sigE | CSACC_13390 | CSACC_13370 | PRC-barrel domain protein. | RNA polymerase sigma-E factor precursor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.720 |
| AQR99530.1 | sigF_2 | CSACC_13390 | CSACC_13380 | PRC-barrel domain protein. | RNA polymerase sigma-F factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.741 |
| AQR99530.1 | spoIIE | CSACC_13390 | CSACC_01350 | PRC-barrel domain protein. | Stage II sporulation protein E. | 0.642 |
| AQR99530.1 | spoIIIAE | CSACC_13390 | CSACC_26910 | PRC-barrel domain protein. | Stage III sporulation protein AE precursor. | 0.632 |
| AQR99530.1 | spoIIM | CSACC_13390 | CSACC_26570 | PRC-barrel domain protein. | Stage II sporulation protein M. | 0.661 |
| AQR99530.1 | yunB | CSACC_13390 | CSACC_11330 | PRC-barrel domain protein. | Sporulation protein YunB. | 0.686 |
| SpoIIGA | AQR99530.1 | CSACC_13360 | CSACC_13390 | Sporulation factor SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | PRC-barrel domain protein. | 0.754 |
| SpoIIGA | YqfC | CSACC_13360 | CSACC_10880 | Sporulation factor SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | YabP family protein. | 0.705 |
| SpoIIGA | YqfD | CSACC_13360 | CSACC_10890 | Sporulation factor SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | Putative stage IV sporulation protein YqfD. | 0.790 |
| SpoIIGA | nrdR | CSACC_13360 | CSACC_13400 | Sporulation factor SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | Transcriptional repressor NrdR; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family. | 0.688 |
| SpoIIGA | sigE | CSACC_13360 | CSACC_13370 | Sporulation factor SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | RNA polymerase sigma-E factor precursor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.890 |
| SpoIIGA | sigF_2 | CSACC_13360 | CSACC_13380 | Sporulation factor SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | RNA polymerase sigma-F factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.894 |
| SpoIIGA | spoIIE | CSACC_13360 | CSACC_01350 | Sporulation factor SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | Stage II sporulation protein E. | 0.953 |
| SpoIIGA | spoIIIAE | CSACC_13360 | CSACC_26910 | Sporulation factor SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | Stage III sporulation protein AE precursor. | 0.719 |
| SpoIIGA | spoIIM | CSACC_13360 | CSACC_26570 | Sporulation factor SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | Stage II sporulation protein M. | 0.806 |
| SpoIIGA | yunB | CSACC_13360 | CSACC_11330 | Sporulation factor SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | Sporulation protein YunB. | 0.690 |
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