STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQR99710.1Heavy-metal-associated domain protein. (67 aa)    
Predicted Functional Partners:
pacS
Putative copper-transporting ATPase PacS.
  
 
 0.757
AQS00711.1
Hypothetical protein.
  
 
 0.743
cadA_1
Cadmium, zinc and cobalt-transporting ATPase.
  
 
 0.729
cadA_2
Cadmium, zinc and cobalt-transporting ATPase.
  
 
 0.729
copA_3
Copper-exporting P-type ATPase A.
  
 
 0.729
copA_4
Copper-exporting P-type ATPase A.
  
 
 0.729
rplN
50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.
    
   0.571
alkH
Aldehyde dehydrogenase.
     
 0.500
mecI
Methicillin resistance regulatory protein MecI.
  
  
 0.463
blaI
Penicillinase repressor.
  
  
 0.463
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
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