STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ftsH_2ATP-dependent zinc metalloprotease FtsH. (363 aa)    
Predicted Functional Partners:
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.
   
 0.983
htrB
Serine protease Do-like HtrB.
   
 0.842
AQS02444.1
Hypothetical protein.
   
 0.842
AQS02085.1
Hypothetical protein.
  
 
 0.727
hflK
Modulator of FtsH protease HflK.
   
 
 0.694
AQS00331.1
Ankyrin repeat protein.
    
 0.690
AQR99099.1
Chromosome segregation protein.
   
 
 0.619
sbcC
Nuclease SbcCD subunit C.
   
 
 0.619
AQS01074.1
Hypothetical protein.
   
 
 0.619
polC_1
DNA polymerase III PolC-type.
  
 
   0.610
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.