Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
dhaLPTS-dependent dihydroxyacetone kinase, ADP-binding subunit DhaL. (209 aa)    
Predicted Functional Partners:
dhaM
PTS-dependent dihydroxyacetone kinase, phosphotransferase subunit DhaM.
 
 0.999
dhaK_2
PTS-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit DhaK.
  
 0.996
dhaK_1
PTS-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit DhaK.
  
 0.993
egsA_1
Glycerol-1-phosphate dehydrogenase.
  
 
 0.824
egsA_2
Glycerol-1-phosphate dehydrogenase.
  
 
 0.824
lhgO_2
L-2-hydroxyglutarate oxidase LhgO.
    
 0.810
gpsA_1
Glycerol-3-phosphate dehydrogenase; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
   
 
 0.806
gpsA_2
Glycerol-3-phosphate dehydrogenase; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
   
 
 0.806
glpF
Glycerol uptake facilitator protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
 
  
 0.709
acoR_2
Acetoin dehydrogenase operon transcriptional activator AcoR.
   
 
 0.639
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
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