Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
bioY_1 | bioY_2 | CSACC_16160 | CSACC_23530 | Biotin transporter BioY. | Biotin transporter BioY. | 0.923 |
bioY_1 | bioY_3 | CSACC_16160 | CSACC_28130 | Biotin transporter BioY. | Biotin transporter BioY. | 0.923 |
bioY_1 | ecfA1_1 | CSACC_16160 | CSACC_02320 | Biotin transporter BioY. | Energy-coupling factor transporter ATP-binding protein EcfA1; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. | 0.937 |
bioY_1 | ecfA1_2 | CSACC_16160 | CSACC_21630 | Biotin transporter BioY. | Energy-coupling factor transporter ATP-binding protein EcfA1. | 0.919 |
bioY_1 | ecfA2_1 | CSACC_16160 | CSACC_02330 | Biotin transporter BioY. | Energy-coupling factor transporter ATP-binding protein EcfA2; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. | 0.935 |
bioY_1 | ecfA2_2 | CSACC_16160 | CSACC_21640 | Biotin transporter BioY. | Energy-coupling factor transporter ATP-binding protein EcfA2. | 0.919 |
bioY_1 | ecfT_1 | CSACC_16160 | CSACC_02340 | Biotin transporter BioY. | Energy-coupling factor transporter transmembrane protein EcfT; Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. | 0.958 |
bioY_1 | ecfT_2 | CSACC_16160 | CSACC_17000 | Biotin transporter BioY. | Energy-coupling factor transporter transmembrane protein EcfT. | 0.924 |
bioY_1 | ecfT_3 | CSACC_16160 | CSACC_21620 | Biotin transporter BioY. | Energy-coupling factor transporter transmembrane protein EcfT. | 0.924 |
bioY_1 | ecfT_4 | CSACC_16160 | CSACC_31930 | Biotin transporter BioY. | Energy-coupling factor transporter transmembrane protein EcfT. | 0.924 |
bioY_2 | bioY_1 | CSACC_23530 | CSACC_16160 | Biotin transporter BioY. | Biotin transporter BioY. | 0.923 |
bioY_2 | bioY_3 | CSACC_23530 | CSACC_28130 | Biotin transporter BioY. | Biotin transporter BioY. | 0.917 |
bioY_2 | ecfA1_1 | CSACC_23530 | CSACC_02320 | Biotin transporter BioY. | Energy-coupling factor transporter ATP-binding protein EcfA1; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. | 0.935 |
bioY_2 | ecfA1_2 | CSACC_23530 | CSACC_21630 | Biotin transporter BioY. | Energy-coupling factor transporter ATP-binding protein EcfA1. | 0.928 |
bioY_2 | ecfA2_1 | CSACC_23530 | CSACC_02330 | Biotin transporter BioY. | Energy-coupling factor transporter ATP-binding protein EcfA2; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. | 0.932 |
bioY_2 | ecfA2_2 | CSACC_23530 | CSACC_21640 | Biotin transporter BioY. | Energy-coupling factor transporter ATP-binding protein EcfA2. | 0.919 |
bioY_2 | ecfT_1 | CSACC_23530 | CSACC_02340 | Biotin transporter BioY. | Energy-coupling factor transporter transmembrane protein EcfT; Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. | 0.946 |
bioY_2 | ecfT_2 | CSACC_23530 | CSACC_17000 | Biotin transporter BioY. | Energy-coupling factor transporter transmembrane protein EcfT. | 0.924 |
bioY_2 | ecfT_3 | CSACC_23530 | CSACC_21620 | Biotin transporter BioY. | Energy-coupling factor transporter transmembrane protein EcfT. | 0.933 |
bioY_2 | ecfT_4 | CSACC_23530 | CSACC_31930 | Biotin transporter BioY. | Energy-coupling factor transporter transmembrane protein EcfT. | 0.935 |
page 1 of 5