STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mglB_3D-galactose-binding periplasmic protein precursor. (346 aa)    
Predicted Functional Partners:
mglB_4
D-galactose-binding periplasmic protein precursor.
 
  
 
0.958
barA_1
Signal transduction histidine-protein kinase BarA.
   
 
 0.745
ypdA_1
Sensor histidine kinase YpdA.
 
 
 0.742
AQS00084.1
Putative histidine kinase sensor domain protein.
  
 
 0.741
yehU_1
Putative sensor-like histidine kinase.
 
 
 0.712
todS_6
Sensor histidine kinase TodS.
   
 
 0.710
arcB
Aerobic respiration control sensor protein ArcB.
   
 
 0.706
rbsC_1
Ribose transport system permease protein RbsC; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.653
mglB_7
D-galactose-binding periplasmic protein precursor.
  
     0.653
rbsC_2
Ribose transport system permease protein RbsC; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.645
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
Server load: low (8%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.