STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arsC1Arsenate-mycothiol transferase ArsC1. (137 aa)    
Predicted Functional Partners:
arsA
Arsenical pump-driving ATPase.
   
 0.932
ArsB
Sodium bile acid symporter family protein.
  
  
 0.916
sdpR_1
Transcriptional repressor SdpR.
 
  
 0.800
cdr_1
Coenzyme A disulfide reductase; Belongs to the sulfur carrier protein TusA family.
   
 
 0.781
trxB_1
Thioredoxin reductase.
  
 
 0.744
grsB_2
Gramicidin S synthase 2.
  
 
 0.664
trxA
Thioredoxin; Belongs to the thioredoxin family.
  
 
 0.651
AQR99471.1
Thioredoxin C-2; Belongs to the thioredoxin family.
  
 
 0.651
arsD
Arsenical resistance operon trans-acting repressor ArsD.
     
 0.650
pspE
Thiosulfate sulfurtransferase PspE precursor.
   
 
 0.641
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
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