Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AQR99898.1 | mntH_1 | CSACC_17070 | CSACC_17080 | Hypothetical protein. | Divalent metal cation transporter MntH. | 0.419 |
AQR99900.1 | dadA_1 | CSACC_17090 | CSACC_17100 | Hypothetical protein. | 2-dehydropantoate 2-reductase. | 0.691 |
AQR99900.1 | mntH_1 | CSACC_17090 | CSACC_17080 | Hypothetical protein. | Divalent metal cation transporter MntH. | 0.500 |
dadA_1 | AQR99900.1 | CSACC_17100 | CSACC_17090 | 2-dehydropantoate 2-reductase. | Hypothetical protein. | 0.691 |
dadA_1 | mntH_1 | CSACC_17100 | CSACC_17080 | 2-dehydropantoate 2-reductase. | Divalent metal cation transporter MntH. | 0.400 |
mntH_1 | AQR99898.1 | CSACC_17080 | CSACC_17070 | Divalent metal cation transporter MntH. | Hypothetical protein. | 0.419 |
mntH_1 | AQR99900.1 | CSACC_17080 | CSACC_17090 | Divalent metal cation transporter MntH. | Hypothetical protein. | 0.500 |
mntH_1 | dadA_1 | CSACC_17080 | CSACC_17100 | Divalent metal cation transporter MntH. | 2-dehydropantoate 2-reductase. | 0.400 |
mntH_1 | pxpA | CSACC_17080 | CSACC_30800 | Divalent metal cation transporter MntH. | LamB/YcsF family protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. | 0.410 |
mntH_1 | znuB | CSACC_17080 | CSACC_39810 | Divalent metal cation transporter MntH. | High-affinity zinc uptake system membrane protein ZnuB. | 0.534 |
mntH_1 | znuC | CSACC_17080 | CSACC_39800 | Divalent metal cation transporter MntH. | High-affinity zinc uptake system ATP-binding protein ZnuC. | 0.428 |
pxpA | mntH_1 | CSACC_30800 | CSACC_17080 | LamB/YcsF family protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. | Divalent metal cation transporter MntH. | 0.410 |
znuB | mntH_1 | CSACC_39810 | CSACC_17080 | High-affinity zinc uptake system membrane protein ZnuB. | Divalent metal cation transporter MntH. | 0.534 |
znuB | znuC | CSACC_39810 | CSACC_39800 | High-affinity zinc uptake system membrane protein ZnuB. | High-affinity zinc uptake system ATP-binding protein ZnuC. | 0.999 |
znuC | mntH_1 | CSACC_39800 | CSACC_17080 | High-affinity zinc uptake system ATP-binding protein ZnuC. | Divalent metal cation transporter MntH. | 0.428 |
znuC | znuB | CSACC_39800 | CSACC_39810 | High-affinity zinc uptake system ATP-binding protein ZnuC. | High-affinity zinc uptake system membrane protein ZnuB. | 0.999 |