Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
YisYArylesterase. (270 aa)    
Predicted Functional Partners:
grsB_2
Gramicidin S synthase 2.
 
 
 0.642
mmgC_1
acyl-CoA dehydrogenase.
  
 0.598
ydaD
General stress protein 39.
 
 0.545
lgrD_2
Linear gramicidin synthase subunit D.
  
 
 0.531
AQS02228.1
Four helix bundle sensory module for signal transduction.
  
     0.525
AQS00331.1
Ankyrin repeat protein.
  
 0.524
AQS02085.1
Hypothetical protein.
  
 0.524
acdA_1
acyl-CoA dehydrogenase.
   
 0.510
acdA_2
acyl-CoA dehydrogenase.
   
 0.510
mmgC_2
acyl-CoA dehydrogenase.
   
 0.510
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.