STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
psf-14'-phosphopantetheinyl transferase psf-1; Belongs to the P-Pant transferase superfamily. (231 aa)    
Predicted Functional Partners:
sfp
4'-phosphopantetheinyl transferase sfp.
  
  
  0.970
srfAA
Surfactin synthase subunit 1.
 
 
 0.942
tycC
Tyrocidine synthase 3.
 
 
 0.941
mbtB_2
Phenyloxazoline synthase MbtB.
 
 
 0.936
grsB_2
Gramicidin S synthase 2.
 
 
 0.929
coaE
dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.
     
 0.903
acpH
Acyl carrier protein phosphodiesterase.
     
  0.900
lgrD_2
Linear gramicidin synthase subunit D.
 
 
 0.871
grsB_1
Gramicidin S synthase 2.
 
 
 0.798
mbtB_1
Phenyloxazoline synthase MbtB.
 
 
 0.765
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.