Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AQS00024.1 | YedF2 | CSACC_18320 | CSACC_18330 | Hypothetical protein. | SirA-like protein; Belongs to the sulfur carrier protein TusA family. | 0.849 |
AQS00024.1 | YqeC | CSACC_18320 | CSACC_18310 | Hypothetical protein. | Hypothetical protein. | 0.974 |
AQS00024.1 | bcrC_2 | CSACC_18320 | CSACC_18350 | Hypothetical protein. | benzoyl-CoA reductase subunit C. | 0.494 |
AQS00024.1 | cdr_1 | CSACC_18320 | CSACC_14970 | Hypothetical protein. | Coenzyme A disulfide reductase; Belongs to the sulfur carrier protein TusA family. | 0.535 |
AQS00024.1 | csd | CSACC_18320 | CSACC_45150 | Hypothetical protein. | Putative cysteine desulfurase. | 0.481 |
AQS00024.1 | selD | CSACC_18320 | CSACC_18340 | Hypothetical protein. | Selenide, water dikinase; Synthesizes selenophosphate from selenide and ATP. | 0.764 |
AQS00024.1 | sufS_2 | CSACC_18320 | CSACC_41560 | Hypothetical protein. | Cysteine desulfurase SufS. | 0.402 |
YedF2 | AQS00024.1 | CSACC_18330 | CSACC_18320 | SirA-like protein; Belongs to the sulfur carrier protein TusA family. | Hypothetical protein. | 0.849 |
YedF2 | YqeC | CSACC_18330 | CSACC_18310 | SirA-like protein; Belongs to the sulfur carrier protein TusA family. | Hypothetical protein. | 0.839 |
YedF2 | bcrC_2 | CSACC_18330 | CSACC_18350 | SirA-like protein; Belongs to the sulfur carrier protein TusA family. | benzoyl-CoA reductase subunit C. | 0.886 |
YedF2 | cdr_1 | CSACC_18330 | CSACC_14970 | SirA-like protein; Belongs to the sulfur carrier protein TusA family. | Coenzyme A disulfide reductase; Belongs to the sulfur carrier protein TusA family. | 0.768 |
YedF2 | csd | CSACC_18330 | CSACC_45150 | SirA-like protein; Belongs to the sulfur carrier protein TusA family. | Putative cysteine desulfurase. | 0.714 |
YedF2 | fldI_2 | CSACC_18330 | CSACC_18360 | SirA-like protein; Belongs to the sulfur carrier protein TusA family. | R-phenyllactate dehydratase activator. | 0.682 |
YedF2 | iscS_1 | CSACC_18330 | CSACC_13170 | SirA-like protein; Belongs to the sulfur carrier protein TusA family. | Cysteine desulfurase IscS; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily. | 0.647 |
YedF2 | iscS_2 | CSACC_18330 | CSACC_31270 | SirA-like protein; Belongs to the sulfur carrier protein TusA family. | Cysteine desulfurase IscS. | 0.647 |
YedF2 | selD | CSACC_18330 | CSACC_18340 | SirA-like protein; Belongs to the sulfur carrier protein TusA family. | Selenide, water dikinase; Synthesizes selenophosphate from selenide and ATP. | 0.957 |
YedF2 | sufS_2 | CSACC_18330 | CSACC_41560 | SirA-like protein; Belongs to the sulfur carrier protein TusA family. | Cysteine desulfurase SufS. | 0.601 |
YqeC | AQS00024.1 | CSACC_18310 | CSACC_18320 | Hypothetical protein. | Hypothetical protein. | 0.974 |
YqeC | YedF2 | CSACC_18310 | CSACC_18330 | Hypothetical protein. | SirA-like protein; Belongs to the sulfur carrier protein TusA family. | 0.839 |
YqeC | bcrC_2 | CSACC_18310 | CSACC_18350 | Hypothetical protein. | benzoyl-CoA reductase subunit C. | 0.467 |
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