STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mmgC_1acyl-CoA dehydrogenase. (635 aa)    
Predicted Functional Partners:
acrB_2
acryloyl-CoA reductase electron transfer subunit gamma.
 
 0.980
acrB_3
acryloyl-CoA reductase electron transfer subunit gamma.
 
 0.976
acrB_4
acryloyl-CoA reductase electron transfer subunit gamma.
 
 0.976
mmgB
Putative 3-hydroxybutyryl-CoA dehydrogenase.
 
 0.974
acrB_1
acryloyl-CoA reductase electron transfer subunit gamma.
 
 0.973
nifJ_1
Pyruvate-flavodoxin oxidoreductase.
  
 0.954
nifJ_2
Pyruvate-flavodoxin oxidoreductase.
  
 0.954
echA8_1
Putative enoyl-CoA hydratase echA8; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.941
echA8_2
Putative enoyl-CoA hydratase echA8; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.936
AQR98894.1
NADH oxidase.
  
 
 0.924
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.