Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AspB | argG | CSACC_39650 | CSACC_07150 | Aspartate aminotransferase. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.926 |
AspB | asD | CSACC_39650 | CSACC_16100 | Aspartate aminotransferase. | Bifunctional aspartate aminotransferase and L-aspartate beta-decarboxylase. | 0.900 |
AspB | asnB_1 | CSACC_39650 | CSACC_18870 | Aspartate aminotransferase. | Asparagine synthetase B. | 0.903 |
AspB | aspA_1 | CSACC_39650 | CSACC_15250 | Aspartate aminotransferase. | Aspartate ammonia-lyase. | 0.905 |
AspB | aspA_2 | CSACC_39650 | CSACC_18620 | Aspartate aminotransferase. | Aspartate ammonia-lyase. | 0.905 |
AspB | aspC | CSACC_39650 | CSACC_17870 | Aspartate aminotransferase. | Aspartate aminotransferase. | 0.909 |
AspB | nadB | CSACC_39650 | CSACC_10440 | Aspartate aminotransferase. | L-aspartate oxidase. | 0.821 |
AspB | purA | CSACC_39650 | CSACC_45000 | Aspartate aminotransferase. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.915 |
AspB | pyrB | CSACC_39650 | CSACC_12400 | Aspartate aminotransferase. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.918 |
AspB | pyrI | CSACC_39650 | CSACC_12410 | Aspartate aminotransferase. | Aspartate carbamoyltransferase regulatory chain. | 0.900 |
argG | AspB | CSACC_07150 | CSACC_39650 | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | Aspartate aminotransferase. | 0.926 |
argG | asD | CSACC_07150 | CSACC_16100 | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | Bifunctional aspartate aminotransferase and L-aspartate beta-decarboxylase. | 0.926 |
argG | asnB_1 | CSACC_07150 | CSACC_18870 | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | Asparagine synthetase B. | 0.915 |
argG | aspA_1 | CSACC_07150 | CSACC_15250 | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | Aspartate ammonia-lyase. | 0.819 |
argG | aspA_2 | CSACC_07150 | CSACC_18620 | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | Aspartate ammonia-lyase. | 0.819 |
argG | aspC | CSACC_07150 | CSACC_17870 | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | Aspartate aminotransferase. | 0.926 |
argG | nadB | CSACC_07150 | CSACC_10440 | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | L-aspartate oxidase. | 0.916 |
argG | purA | CSACC_07150 | CSACC_45000 | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.937 |
argG | pyrB | CSACC_07150 | CSACC_12400 | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.912 |
argG | pyrI | CSACC_07150 | CSACC_12410 | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | Aspartate carbamoyltransferase regulatory chain. | 0.900 |
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