Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| aspA_1 | nrgA_2 | CSACC_15250 | CSACC_18880 | Aspartate ammonia-lyase. | Ammonium transporter NrgA. | 0.408 |
| barA_1 | glnA_1 | CSACC_21950 | CSACC_11560 | Signal transduction histidine-protein kinase BarA. | Glutamine synthetase; Glutamine synthetase (GS) is an unusual multitasking protein that functions as an enzyme, a transcription coregulator, and a chaperone in ammonium assimilation and in the regulation of genes involved in nitrogen metabolism. It catalyzes the ATP-dependent biosynthesis of glutamine from glutamate and ammonia. Feedback- inhibited GlnA also interacts with and regulates the activity of the transcriptional regulator TnrA. During nitrogen limitation, TnrA is in its DNA-binding active state and turns on the transcription of genes required for nitrogen assimilation. Under [...] | 0.775 |
| barA_1 | glnB_1 | CSACC_21950 | CSACC_33070 | Signal transduction histidine-protein kinase BarA. | Nitrogen regulatory protein P-II 1. | 0.483 |
| barA_1 | glnB_2 | CSACC_21950 | CSACC_44420 | Signal transduction histidine-protein kinase BarA. | Nitrogen regulatory protein P-II; Belongs to the P(II) protein family. | 0.483 |
| barA_1 | nadE | CSACC_21950 | CSACC_12830 | Signal transduction histidine-protein kinase BarA. | Glutamine-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.805 |
| barA_1 | nrgA_2 | CSACC_21950 | CSACC_18880 | Signal transduction histidine-protein kinase BarA. | Ammonium transporter NrgA. | 0.439 |
| barA_1 | pdtaR | CSACC_21950 | CSACC_11570 | Signal transduction histidine-protein kinase BarA. | Putative transcriptional regulatory protein pdtaR. | 0.423 |
| glnA_1 | barA_1 | CSACC_11560 | CSACC_21950 | Glutamine synthetase; Glutamine synthetase (GS) is an unusual multitasking protein that functions as an enzyme, a transcription coregulator, and a chaperone in ammonium assimilation and in the regulation of genes involved in nitrogen metabolism. It catalyzes the ATP-dependent biosynthesis of glutamine from glutamate and ammonia. Feedback- inhibited GlnA also interacts with and regulates the activity of the transcriptional regulator TnrA. During nitrogen limitation, TnrA is in its DNA-binding active state and turns on the transcription of genes required for nitrogen assimilation. Under [...] | Signal transduction histidine-protein kinase BarA. | 0.775 |
| glnA_1 | glnB_1 | CSACC_11560 | CSACC_33070 | Glutamine synthetase; Glutamine synthetase (GS) is an unusual multitasking protein that functions as an enzyme, a transcription coregulator, and a chaperone in ammonium assimilation and in the regulation of genes involved in nitrogen metabolism. It catalyzes the ATP-dependent biosynthesis of glutamine from glutamate and ammonia. Feedback- inhibited GlnA also interacts with and regulates the activity of the transcriptional regulator TnrA. During nitrogen limitation, TnrA is in its DNA-binding active state and turns on the transcription of genes required for nitrogen assimilation. Under [...] | Nitrogen regulatory protein P-II 1. | 0.479 |
| glnA_1 | glnB_2 | CSACC_11560 | CSACC_44420 | Glutamine synthetase; Glutamine synthetase (GS) is an unusual multitasking protein that functions as an enzyme, a transcription coregulator, and a chaperone in ammonium assimilation and in the regulation of genes involved in nitrogen metabolism. It catalyzes the ATP-dependent biosynthesis of glutamine from glutamate and ammonia. Feedback- inhibited GlnA also interacts with and regulates the activity of the transcriptional regulator TnrA. During nitrogen limitation, TnrA is in its DNA-binding active state and turns on the transcription of genes required for nitrogen assimilation. Under [...] | Nitrogen regulatory protein P-II; Belongs to the P(II) protein family. | 0.479 |
| glnA_1 | nadE | CSACC_11560 | CSACC_12830 | Glutamine synthetase; Glutamine synthetase (GS) is an unusual multitasking protein that functions as an enzyme, a transcription coregulator, and a chaperone in ammonium assimilation and in the regulation of genes involved in nitrogen metabolism. It catalyzes the ATP-dependent biosynthesis of glutamine from glutamate and ammonia. Feedback- inhibited GlnA also interacts with and regulates the activity of the transcriptional regulator TnrA. During nitrogen limitation, TnrA is in its DNA-binding active state and turns on the transcription of genes required for nitrogen assimilation. Under [...] | Glutamine-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.668 |
| glnA_1 | nrgA_2 | CSACC_11560 | CSACC_18880 | Glutamine synthetase; Glutamine synthetase (GS) is an unusual multitasking protein that functions as an enzyme, a transcription coregulator, and a chaperone in ammonium assimilation and in the regulation of genes involved in nitrogen metabolism. It catalyzes the ATP-dependent biosynthesis of glutamine from glutamate and ammonia. Feedback- inhibited GlnA also interacts with and regulates the activity of the transcriptional regulator TnrA. During nitrogen limitation, TnrA is in its DNA-binding active state and turns on the transcription of genes required for nitrogen assimilation. Under [...] | Ammonium transporter NrgA. | 0.735 |
| glnA_1 | pdtaR | CSACC_11560 | CSACC_11570 | Glutamine synthetase; Glutamine synthetase (GS) is an unusual multitasking protein that functions as an enzyme, a transcription coregulator, and a chaperone in ammonium assimilation and in the regulation of genes involved in nitrogen metabolism. It catalyzes the ATP-dependent biosynthesis of glutamine from glutamate and ammonia. Feedback- inhibited GlnA also interacts with and regulates the activity of the transcriptional regulator TnrA. During nitrogen limitation, TnrA is in its DNA-binding active state and turns on the transcription of genes required for nitrogen assimilation. Under [...] | Putative transcriptional regulatory protein pdtaR. | 0.867 |
| glnA_1 | tetR | CSACC_11560 | CSACC_33990 | Glutamine synthetase; Glutamine synthetase (GS) is an unusual multitasking protein that functions as an enzyme, a transcription coregulator, and a chaperone in ammonium assimilation and in the regulation of genes involved in nitrogen metabolism. It catalyzes the ATP-dependent biosynthesis of glutamine from glutamate and ammonia. Feedback- inhibited GlnA also interacts with and regulates the activity of the transcriptional regulator TnrA. During nitrogen limitation, TnrA is in its DNA-binding active state and turns on the transcription of genes required for nitrogen assimilation. Under [...] | Tetracycline repressor protein class B from transposon Tn10. | 0.541 |
| glnB_1 | barA_1 | CSACC_33070 | CSACC_21950 | Nitrogen regulatory protein P-II 1. | Signal transduction histidine-protein kinase BarA. | 0.483 |
| glnB_1 | glnA_1 | CSACC_33070 | CSACC_11560 | Nitrogen regulatory protein P-II 1. | Glutamine synthetase; Glutamine synthetase (GS) is an unusual multitasking protein that functions as an enzyme, a transcription coregulator, and a chaperone in ammonium assimilation and in the regulation of genes involved in nitrogen metabolism. It catalyzes the ATP-dependent biosynthesis of glutamine from glutamate and ammonia. Feedback- inhibited GlnA also interacts with and regulates the activity of the transcriptional regulator TnrA. During nitrogen limitation, TnrA is in its DNA-binding active state and turns on the transcription of genes required for nitrogen assimilation. Under [...] | 0.479 |
| glnB_1 | glnB_2 | CSACC_33070 | CSACC_44420 | Nitrogen regulatory protein P-II 1. | Nitrogen regulatory protein P-II; Belongs to the P(II) protein family. | 0.912 |
| glnB_1 | nadE | CSACC_33070 | CSACC_12830 | Nitrogen regulatory protein P-II 1. | Glutamine-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.487 |
| glnB_1 | nrgA_2 | CSACC_33070 | CSACC_18880 | Nitrogen regulatory protein P-II 1. | Ammonium transporter NrgA. | 0.902 |
| glnB_2 | barA_1 | CSACC_44420 | CSACC_21950 | Nitrogen regulatory protein P-II; Belongs to the P(II) protein family. | Signal transduction histidine-protein kinase BarA. | 0.483 |
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