STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQS00082.1Hypothetical protein. (41 aa)    
Predicted Functional Partners:
pehX
Exo-poly-alpha-D-galacturonosidase precursor; Belongs to the glycosyl hydrolase 28 family.
  
    0.587
YhiD
Putative Mg(2+) transport ATPase.
  
 
 0.557
AQS02413.1
Keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase.
 
    0.458
clcA
H(+)/Cl(-) exchange transporter ClcA.
  
 
 0.442
AQS02056.1
Cobalt-dependent inorganic pyrophosphatase.
     
 0.438
adhE_1
Aldehyde-alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
   
 0.437
AQS00083.1
Hypothetical protein.
       0.432
walR_2
Transcriptional regulatory protein WalR.
      
 0.420
AQR99310.1
Subtilase family protein.
   
 0.408
AQR99311.1
Subtilase family protein.
   
 0.408
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.