Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AQS00143.1 | AQS00145.1 | CSACC_19590 | CSACC_19610 | KWG leptospira. | Hypothetical protein. | 0.534 |
AQS00143.1 | rpoE | CSACC_19590 | CSACC_19600 | KWG leptospira. | RNA polymerase factor sigma-70; Belongs to the sigma-70 factor family. ECF subfamily. | 0.534 |
AQS00145.1 | AQS00143.1 | CSACC_19610 | CSACC_19590 | Hypothetical protein. | KWG leptospira. | 0.534 |
AQS00145.1 | cheR_1 | CSACC_19610 | CSACC_20010 | Hypothetical protein. | Chemotaxis protein methyltransferase. | 0.457 |
AQS00145.1 | rpoA | CSACC_19610 | CSACC_02300 | Hypothetical protein. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.593 |
AQS00145.1 | rpoB | CSACC_19610 | CSACC_01940 | Hypothetical protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.598 |
AQS00145.1 | rpoC | CSACC_19610 | CSACC_01950 | Hypothetical protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.600 |
AQS00145.1 | rpoE | CSACC_19610 | CSACC_19600 | Hypothetical protein. | RNA polymerase factor sigma-70; Belongs to the sigma-70 factor family. ECF subfamily. | 0.952 |
AQS00145.1 | rpoZ | CSACC_19610 | CSACC_13580 | Hypothetical protein. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.593 |
AQS00145.1 | yscN | CSACC_19610 | CSACC_39100 | Hypothetical protein. | Putative ATP synthase YscN. | 0.459 |
AQS00199.1 | cheR_1 | CSACC_20150 | CSACC_20010 | Hypothetical protein. | Chemotaxis protein methyltransferase. | 0.457 |
AQS00199.1 | rpoA | CSACC_20150 | CSACC_02300 | Hypothetical protein. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.593 |
AQS00199.1 | rpoB | CSACC_20150 | CSACC_01940 | Hypothetical protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.598 |
AQS00199.1 | rpoC | CSACC_20150 | CSACC_01950 | Hypothetical protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.600 |
AQS00199.1 | rpoE | CSACC_20150 | CSACC_19600 | Hypothetical protein. | RNA polymerase factor sigma-70; Belongs to the sigma-70 factor family. ECF subfamily. | 0.489 |
AQS00199.1 | rpoZ | CSACC_20150 | CSACC_13580 | Hypothetical protein. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.593 |
AQS00199.1 | yscN | CSACC_20150 | CSACC_39100 | Hypothetical protein. | Putative ATP synthase YscN. | 0.459 |
AQS01304.1 | cheR_1 | CSACC_31320 | CSACC_20010 | Hypothetical protein. | Chemotaxis protein methyltransferase. | 0.457 |
AQS01304.1 | rpoA | CSACC_31320 | CSACC_02300 | Hypothetical protein. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.593 |
AQS01304.1 | rpoB | CSACC_31320 | CSACC_01940 | Hypothetical protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.598 |
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