Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AQS00079.1 | mepA_6 | CSACC_18950 | CSACC_20000 | MarR family protein. | Multidrug export protein MepA. | 0.483 |
AQS00079.1 | slyA_1 | CSACC_18950 | CSACC_19990 | MarR family protein. | Transcriptional regulator SlyA. | 0.642 |
MarR2 | mepA_6 | CSACC_35930 | CSACC_20000 | MarR family protein. | Multidrug export protein MepA. | 0.409 |
MarR2 | slyA_1 | CSACC_35930 | CSACC_19990 | MarR family protein. | Transcriptional regulator SlyA. | 0.477 |
gap | mepA_6 | CSACC_40200 | CSACC_20000 | Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | Multidrug export protein MepA. | 0.448 |
gap | rpsA_2 | CSACC_40200 | CSACC_06030 | Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 30S ribosomal protein S1. | 0.766 |
gap | rpsA_3 | CSACC_40200 | CSACC_22350 | Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 30S ribosomal protein S1; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family. | 0.766 |
mepA_6 | AQS00079.1 | CSACC_20000 | CSACC_18950 | Multidrug export protein MepA. | MarR family protein. | 0.483 |
mepA_6 | MarR2 | CSACC_20000 | CSACC_35930 | Multidrug export protein MepA. | MarR family protein. | 0.409 |
mepA_6 | gap | CSACC_20000 | CSACC_40200 | Multidrug export protein MepA. | Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.448 |
mepA_6 | rpsA_2 | CSACC_20000 | CSACC_06030 | Multidrug export protein MepA. | 30S ribosomal protein S1. | 0.462 |
mepA_6 | rpsA_3 | CSACC_20000 | CSACC_22350 | Multidrug export protein MepA. | 30S ribosomal protein S1; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family. | 0.462 |
mepA_6 | slyA_1 | CSACC_20000 | CSACC_19990 | Multidrug export protein MepA. | Transcriptional regulator SlyA. | 0.835 |
rpsA_2 | gap | CSACC_06030 | CSACC_40200 | 30S ribosomal protein S1. | Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.766 |
rpsA_2 | mepA_6 | CSACC_06030 | CSACC_20000 | 30S ribosomal protein S1. | Multidrug export protein MepA. | 0.462 |
rpsA_2 | rpsA_3 | CSACC_06030 | CSACC_22350 | 30S ribosomal protein S1. | 30S ribosomal protein S1; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family. | 0.405 |
rpsA_3 | gap | CSACC_22350 | CSACC_40200 | 30S ribosomal protein S1; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family. | Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.766 |
rpsA_3 | mepA_6 | CSACC_22350 | CSACC_20000 | 30S ribosomal protein S1; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family. | Multidrug export protein MepA. | 0.462 |
rpsA_3 | rpsA_2 | CSACC_22350 | CSACC_06030 | 30S ribosomal protein S1; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family. | 30S ribosomal protein S1. | 0.405 |
slyA_1 | AQS00079.1 | CSACC_19990 | CSACC_18950 | Transcriptional regulator SlyA. | MarR family protein. | 0.642 |
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