STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cheB_1Chemotaxis response regulator protein-glutamate methylesterase. (348 aa)    
Predicted Functional Partners:
cheA_1
Chemotaxis protein CheA.
 
 0.992
cheA_5
Chemotaxis protein CheA.
 
 0.981
cheA_2
Chemotaxis protein CheA.
 
 0.980
cheA_4
Chemotaxis protein CheA.
 
 0.979
cheA_3
Chemotaxis protein CheA.
 
 0.978
cheA_6
Chemotaxis protein CheA.
 
 0.975
cheW_1
Chemotaxis protein CheW.
 
 
 0.974
cheR_1
Chemotaxis protein methyltransferase.
  
 0.964
tap_1
Methyl-accepting chemotaxis protein IV.
 
 0.960
fliN
Flagellar motor switch protein FliN.
  
  
 0.960
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.