STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rsbT_2Serine/threonine-protein kinase RsbT. (348 aa)    
Predicted Functional Partners:
rsbRA
RsbT co-antagonist protein RsbRA.
 
 
 0.999
rsbS
RsbT antagonist protein RsbS.
 
 
 0.999
AQS00084.1
Putative histidine kinase sensor domain protein.
  
  
 0.995
barA_2
Signal transduction histidine-protein kinase BarA.
 
  
 0.994
rsbV
anti-sigma-B factor antagonist; Belongs to the anti-sigma-factor antagonist family.
  
 
 0.993
dosP
Oxygen sensor protein DosP.
  
 
 0.982
fliG
Flagellar motor switch protein FliG.
  
    0.972
flgB
Flagellar basal body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
   
    0.969
thiH_1
2-iminoacetate synthase.
   
  
 0.965
thiH_2
2-iminoacetate synthase.
   
  
 0.965
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
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