STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQS00235.1Hypothetical protein. (75 aa)    
Predicted Functional Partners:
zraS
Sensor protein ZraS.
       0.615
cheA_3
Chemotaxis protein CheA.
       0.615
mprA_2
Response regulator MprA.
       0.615
rsbT_2
Serine/threonine-protein kinase RsbT.
       0.603
rsbS
RsbT antagonist protein RsbS.
       0.520
rsbT_1
Serine/threonine-protein kinase RsbT.
       0.520
rsbRA
RsbT co-antagonist protein RsbRA.
       0.501
parA
Chromosome partitioning protein ParA.
       0.443
cheW_3
Chemotaxis protein CheW.
       0.443
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.