Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
fruA_2Fructan beta-fructosidase precursor. (1387 aa)    
Predicted Functional Partners:
fruA_3
PTS system fructose-specific EIIABC component.
  
 
 0.962
rbsK_2
Ribokinase.
 
 
 0.947
sacX
Negative regulator of SacY activity.
 
  
 0.914
bglF
PTS system beta-glucoside-specific EIIBCA component.
 
  
 0.885
ptsG_1
PTS system glucose-specific EIICBA component.
  
  
 0.848
iap_2
Putative endopeptidase p60 precursor.
  
  
 0.837
malP
PTS system maltose-specific EIICB component.
  
  
 0.706
ptsG_2
PTS system glucose-specific EIICBA component.
  
  
 0.706
AQS02313.1
Glycosyl transferases group 1.
  
  
 0.694
arsC1
Arsenate-mycothiol transferase ArsC1.
  
 
 0.623
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
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