STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQS00288.1Hypothetical protein. (56 aa)    
Predicted Functional Partners:
AQS00298.1
Hypothetical protein.
  
     0.642
AQS00653.1
Hypothetical protein.
  
     0.633
AQS02397.1
Hypothetical protein.
  
     0.564
AQS02228.1
Four helix bundle sensory module for signal transduction.
  
     0.465
ltaS1_1
Lipoteichoic acid synthase 1.
  
     0.457
AQS00124.1
Hypothetical protein.
  
     0.455
bcsB
Cyclic di-GMP-binding protein precursor.
       0.449
agrB_2
Accessory protein regulator protein B.
  
     0.443
plc_2
Phospholipase C precursor.
  
     0.438
AQS00284.1
Response regulator PleD.
       0.436
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.