nikB protein (Clostridium saccharobutylicum)

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Predicted Interactions

gene neighborhood

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textmining

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Score

nikB

Nickel transport system permease protein NikB. (312 aa)

Predicted Functional Partners:

gsiD

0.990

oppF_1

0.976

ddpD

0.971

appA

0.970

oppC

0.968

oppD

0.960

oppA

0.893

oppF_2

0.882

mppA

0.562

ykoD_1

0.503

Your Current Organism:

Clostridium saccharobutylicum

NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
appA	ddpD	CSACC_21110	CSACC_21120	Oligopeptide-binding protein AppA precursor.	Putative D,D-dipeptide transport ATP-binding protein DdpD.	0.997
appA	gsiD	CSACC_21110	CSACC_21100	Oligopeptide-binding protein AppA precursor.	Glutathione transport system permease protein GsiD.	0.998
appA	mppA	CSACC_21110	CSACC_03830	Oligopeptide-binding protein AppA precursor.	Periplasmic murein peptide-binding protein precursor.	0.400
appA	nikB	CSACC_21110	CSACC_21090	Oligopeptide-binding protein AppA precursor.	Nickel transport system permease protein NikB.	0.970
appA	oppA	CSACC_21110	CSACC_43680	Oligopeptide-binding protein AppA precursor.	Oligopeptide-binding protein OppA precursor.	0.625
appA	oppC	CSACC_21110	CSACC_43710	Oligopeptide-binding protein AppA precursor.	Oligopeptide transport system permease protein OppC.	0.935
appA	oppD	CSACC_21110	CSACC_43700	Oligopeptide-binding protein AppA precursor.	Oligopeptide transport ATP-binding protein OppD; Belongs to the ABC transporter superfamily.	0.839
appA	oppF_1	CSACC_21110	CSACC_21130	Oligopeptide-binding protein AppA precursor.	Oligopeptide transport ATP-binding protein OppF; Belongs to the ABC transporter superfamily.	0.974
appA	oppF_2	CSACC_21110	CSACC_43690	Oligopeptide-binding protein AppA precursor.	Oligopeptide transport ATP-binding protein OppF; Belongs to the ABC transporter superfamily.	0.879
ddpD	appA	CSACC_21120	CSACC_21110	Putative D,D-dipeptide transport ATP-binding protein DdpD.	Oligopeptide-binding protein AppA precursor.	0.997
ddpD	gsiD	CSACC_21120	CSACC_21100	Putative D,D-dipeptide transport ATP-binding protein DdpD.	Glutathione transport system permease protein GsiD.	0.999
ddpD	mppA	CSACC_21120	CSACC_03830	Putative D,D-dipeptide transport ATP-binding protein DdpD.	Periplasmic murein peptide-binding protein precursor.	0.509
ddpD	nikB	CSACC_21120	CSACC_21090	Putative D,D-dipeptide transport ATP-binding protein DdpD.	Nickel transport system permease protein NikB.	0.971
ddpD	oppA	CSACC_21120	CSACC_43680	Putative D,D-dipeptide transport ATP-binding protein DdpD.	Oligopeptide-binding protein OppA precursor.	0.862
ddpD	oppC	CSACC_21120	CSACC_43710	Putative D,D-dipeptide transport ATP-binding protein DdpD.	Oligopeptide transport system permease protein OppC.	0.985
ddpD	oppF_1	CSACC_21120	CSACC_21130	Putative D,D-dipeptide transport ATP-binding protein DdpD.	Oligopeptide transport ATP-binding protein OppF; Belongs to the ABC transporter superfamily.	0.844
ddpD	oppF_2	CSACC_21120	CSACC_43690	Putative D,D-dipeptide transport ATP-binding protein DdpD.	Oligopeptide transport ATP-binding protein OppF; Belongs to the ABC transporter superfamily.	0.726
ddpD	ykoD_1	CSACC_21120	CSACC_17010	Putative D,D-dipeptide transport ATP-binding protein DdpD.	Putative HMP/thiamine import ATP-binding protein YkoD.	0.663
gsiD	appA	CSACC_21100	CSACC_21110	Glutathione transport system permease protein GsiD.	Oligopeptide-binding protein AppA precursor.	0.998
gsiD	ddpD	CSACC_21100	CSACC_21120	Glutathione transport system permease protein GsiD.	Putative D,D-dipeptide transport ATP-binding protein DdpD.	0.999