STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ecsAABC-type transporter ATP-binding protein EcsA. (243 aa)    
Predicted Functional Partners:
AQS00409.1
Hypothetical protein.
 
    0.973
skfE
SkfA peptide export ATP-binding protein SkfE.
    
0.921
bceA
Bacitracin export ATP-binding protein BceA.
 
  
0.880
AQR98828.1
ABC-2 family transporter protein.
  
 
 0.734
AQS01732.1
ABC-2 family transporter protein.
  
 
 0.709
AQS01734.1
ABC-2 family transporter protein.
  
 
 0.709
macB_4
Macrolide export ATP-binding/permease protein MacB.
 
   
0.627
AQS00422.1
Hypothetical protein.
  
 
 0.605
atpD
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
   
 
 0.601
atpC
ATP synthase epsilon chain; Produces ATP from ADP in the presence of a proton gradient across the membrane.
  
   0.588
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
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