STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQS00454.1Coat F domain protein. (156 aa)    
Predicted Functional Partners:
pyrK_4
Dihydroorotate dehydrogenase B, electron transfer subunit.
 
 
 
 0.701
pyrK_5
Dihydroorotate dehydrogenase B, electron transfer subunit.
 
 
 
 0.679
AQS01363.1
Hypothetical protein.
  
 
   0.632
nifJ_1
Pyruvate-flavodoxin oxidoreductase.
  
  
 0.591
nifJ_2
Pyruvate-flavodoxin oxidoreductase.
  
  
 0.591
gpr_2
L-glyceraldehyde 3-phosphate reductase.
   
   0.590
pyrK_1
Dihydroorotate dehydrogenase B, electron transfer subunit.
   
 
 0.562
pyrK_2
Dihydroorotate dehydrogenase B, electron transfer subunit; Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD(+).
   
 
 0.562
pyrK_3
Dihydroorotate dehydrogenase B, electron transfer subunit.
   
 
 0.562
asrB
Anaerobic sulfite reductase subunit B.
   
 
 0.562
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.