STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQS00475.1Hypothetical protein. (704 aa)    
Predicted Functional Partners:
XkdT1
Hypothetical protein.
 
  
 0.887
AQS00472.1
Hypothetical protein.
  
  
 0.821
AQS00476.1
Hypothetical protein.
       0.773
AQS00473.1
Hypothetical protein.
       0.741
AQS00471.1
Hypothetical protein.
       0.698
AQS01269.1
Hypothetical protein.
 
 
   0.651
AQS01510.1
Hypothetical protein.
   
   0.618
pehX
Exo-poly-alpha-D-galacturonosidase precursor; Belongs to the glycosyl hydrolase 28 family.
   
   0.600
pelL
Pectate lyase L precursor.
   
   0.592
AQS00275.1
Hypothetical protein.
   
   0.592
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.