STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQS00487.1Hypothetical protein. (143 aa)    
Predicted Functional Partners:
AQS00486.1
Phage tail sheath protein.
       0.773
AQS00485.1
Hypothetical protein.
       0.723
AQS00488.1
Hypothetical protein.
       0.714
AQS00489.1
Hypothetical protein.
       0.714
AQS00490.1
Hypothetical protein.
       0.714
AQS00491.1
Phage major capsid protein E.
       0.600
AQS00492.1
Hypothetical protein.
       0.574
AQS00482.1
Hypothetical protein.
       0.494
AQS00483.1
Hypothetical protein.
       0.494
AQS00484.1
Phage XkdN-like protein.
       0.494
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.