STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ctpH_2Methyl-accepting chemotaxis protein CtpH. (1473 aa)    
Predicted Functional Partners:
cheA_4
Chemotaxis protein CheA.
 
 
 0.949
cheW_4
Chemotaxis protein CheW.
 
 
 0.908
cheR2_2
Chemotaxis protein methyltransferase cher2.
 
 
 0.903
cheB_3
Chemotaxis response regulator protein-glutamate methylesterase.
 
 
 0.896
cheA_2
Chemotaxis protein CheA.
 
 
 0.801
cheA_5
Chemotaxis protein CheA.
 
 
 0.799
barA_1
Signal transduction histidine-protein kinase BarA.
  
 
 0.797
cheA_1
Chemotaxis protein CheA.
 
 
 0.787
cheA_6
Chemotaxis protein CheA.
 
 
 0.785
cheV
Chemotaxis protein CheV.
  
 
 0.751
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.