STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cheY_4Chemotaxis protein CheY. (109 aa)    
Predicted Functional Partners:
cheC
CheY-P phosphatase CheC.
 
 0.982
fliN
Flagellar motor switch protein FliN.
 
 0.968
cheA_4
Chemotaxis protein CheA.
 
 0.966
cheW_4
Chemotaxis protein CheW.
  
 
 0.918
cheA_6
Chemotaxis protein CheA.
 
 0.914
cheA_1
Chemotaxis protein CheA.
 
 0.892
cheA_5
Chemotaxis protein CheA.
 
 0.887
cheA_2
Chemotaxis protein CheA.
 
 0.883
cheA_3
Chemotaxis protein CheA.
  
 0.867
mcpB_15
Methyl-accepting chemotaxis protein McpB.
 
  
 0.752
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.