STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQS00573.1Hypothetical protein. (261 aa)    
Predicted Functional Partners:
Cfg
Putative AgrB-like protein.
  
     0.661
AQS01467.1
Hypothetical protein.
  
     0.590
AQS01462.1
Hypothetical protein.
  
     0.576
AQS00572.1
Hypothetical protein.
 
    
0.553
AQS02223.1
ABC-2 family transporter protein.
  
     0.546
mutS_3-2
MutS domain III; Belongs to the DNA mismatch repair MutS family.
  
     0.543
AQS02320.1
Hypothetical protein.
  
    0.487
plc_2
Phospholipase C precursor.
  
     0.468
mutS_5
DNA mismatch repair protein MutS.
  
     0.462
yycG_2
Sensor histidine kinase YycG.
  
     0.460
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.