Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
bglA_3Beta-glucanase precursor. (415 aa)    
Predicted Functional Partners:
xyl3A
Xylan 1,4-beta-xylosidase precursor.
  
 0.591
cel5A
Endoglucanase 5A; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
   
 0.587
celS
Endoglucanase S precursor; Belongs to the glycosyl hydrolase 12 (cellulase H) family.
 
   
 0.563
xynY
Endo-1,4-beta-xylanase Y precursor.
 
   
 0.546
chiA1
Chitinase A1 precursor; Belongs to the glycosyl hydrolase 18 family.
  
  
 0.525
plc_2
Phospholipase C precursor.
       0.516
bglB
Thermostable beta-glucosidase B.
 
  
 0.496
abfB
Extracellular exo-alpha-L-arabinofuranosidase precursor.
 
     0.491
xynC
Glucuronoxylanase XynC precursor.
 
   
 0.472
manA_2
Beta-mannanase/endoglucanase A precursor; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
   
 0.465
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
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