Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AQS00630.1Putative thiamine biosynthesis protein. (334 aa)    
Predicted Functional Partners:
ssuB
Aliphatic sulfonates import ATP-binding protein SsuB.
 
 
 0.989
ssuC_3
Putative aliphatic sulfonates transport permease protein SsuC.
 
 0.982
ssuC_1
Putative aliphatic sulfonates transport permease protein SsuC.
 
 0.913
AQS00632.1
Hypothetical protein.
 
  
 0.903
tauB
Taurine import ATP-binding protein TauB.
 
 
 0.825
ssuC_2
Putative aliphatic sulfonates transport permease protein SsuC.
 
 
 0.815
fbpC
Fe(3+) ions import ATP-binding protein FbpC.
  
 
 0.777
glnB_1
Nitrogen regulatory protein P-II 1.
   
 
 0.522
glnB_2
Nitrogen regulatory protein P-II; Belongs to the P(II) protein family.
   
 
 0.522
urdA
Urocanate reductase precursor.
  
  
 0.515
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
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