Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AQS00634.1Hypothetical protein. (703 aa)    
Predicted Functional Partners:
xynY
Endo-1,4-beta-xylanase Y precursor.
 
 
 
 0.563
barA_1
Signal transduction histidine-protein kinase BarA.
 
  
 0.551
AQR98672.1
Multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1.
  
 
 0.544
AQR99944.1
Multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1.
  
 
 0.544
AQR99995.1
GDSL-like lipase/acylhydrolase.
  
 
 0.544
celS
Endoglucanase S precursor; Belongs to the glycosyl hydrolase 12 (cellulase H) family.
  
 
 0.524
AQS01874.1
Cysteine-rich secretory protein family protein.
  
  
 0.514
lytA_14
Autolysin.
  
  
 0.512
manA_2
Beta-mannanase/endoglucanase A precursor; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
 
 0.500
AQS00221.1
Hypothetical protein.
  
    0.497
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
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