STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQS00653.1Hypothetical protein. (314 aa)    
Predicted Functional Partners:
AQS00288.1
Hypothetical protein.
  
     0.633
AQS02228.1
Four helix bundle sensory module for signal transduction.
  
     0.587
YojE
EamA-like transporter family protein.
       0.539
AQR99923.1
YmaF family protein.
  
     0.486
AQS00465.1
YmaF family protein.
  
     0.479
AQR99782.1
YmaF family protein.
  
     0.464
YisY
Arylesterase.
 
     0.462
AQR98819.1
Hypothetical protein; S-layer homology domain.
  
     0.461
AQS01441.1
Coat F domain protein.
  
     0.411
AQR99737.1
YmaF family protein.
  
     0.404
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.