Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AQS00805.1 | dacB_3 | CSACC_26290 | CSACC_26280 | Hypothetical protein. | D-alanyl-D-alanine carboxypeptidase DacB precursor; Belongs to the peptidase S11 family. | 0.708 |
AQS00805.1 | ribBA | CSACC_26290 | CSACC_14600 | Hypothetical protein. | Riboflavin biosynthesis protein RibBA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.448 |
AQS00805.1 | ribD | CSACC_26290 | CSACC_14580 | Hypothetical protein. | Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 0.447 |
AQS00805.1 | spoVB_2 | CSACC_26290 | CSACC_30910 | Hypothetical protein. | Stage V sporulation protein B. | 0.598 |
AQS00805.1 | ytfJ | CSACC_26290 | CSACC_26300 | Hypothetical protein. | Putative spore protein YtfJ. | 0.906 |
dacB_3 | AQS00805.1 | CSACC_26280 | CSACC_26290 | D-alanyl-D-alanine carboxypeptidase DacB precursor; Belongs to the peptidase S11 family. | Hypothetical protein. | 0.708 |
dacB_3 | ytfJ | CSACC_26280 | CSACC_26300 | D-alanyl-D-alanine carboxypeptidase DacB precursor; Belongs to the peptidase S11 family. | Putative spore protein YtfJ. | 0.756 |
ribBA | AQS00805.1 | CSACC_14600 | CSACC_26290 | Riboflavin biosynthesis protein RibBA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | Hypothetical protein. | 0.448 |
ribBA | ribD | CSACC_14600 | CSACC_14580 | Riboflavin biosynthesis protein RibBA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 0.999 |
ribBA | ytfJ | CSACC_14600 | CSACC_26300 | Riboflavin biosynthesis protein RibBA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | Putative spore protein YtfJ. | 0.448 |
ribD | AQS00805.1 | CSACC_14580 | CSACC_26290 | Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | Hypothetical protein. | 0.447 |
ribD | ribBA | CSACC_14580 | CSACC_14600 | Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | Riboflavin biosynthesis protein RibBA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.999 |
ribD | ytfJ | CSACC_14580 | CSACC_26300 | Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | Putative spore protein YtfJ. | 0.446 |
spoVB_2 | AQS00805.1 | CSACC_30910 | CSACC_26290 | Stage V sporulation protein B. | Hypothetical protein. | 0.598 |
ytfJ | AQS00805.1 | CSACC_26300 | CSACC_26290 | Putative spore protein YtfJ. | Hypothetical protein. | 0.906 |
ytfJ | dacB_3 | CSACC_26300 | CSACC_26280 | Putative spore protein YtfJ. | D-alanyl-D-alanine carboxypeptidase DacB precursor; Belongs to the peptidase S11 family. | 0.756 |
ytfJ | ribBA | CSACC_26300 | CSACC_14600 | Putative spore protein YtfJ. | Riboflavin biosynthesis protein RibBA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.448 |
ytfJ | ribD | CSACC_26300 | CSACC_14580 | Putative spore protein YtfJ. | Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 0.446 |