Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
padHNADH-dependent phenylglyoxylate dehydrogenase subunit epsilon. (408 aa)    
Predicted Functional Partners:
narB
Nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 0.988
padI
NADH-dependent phenylglyoxylate dehydrogenase subunit beta.
 
 
 
 0.947
nasD_2
Nitrite reductase.
 
     0.931
nasD_1
Nitrite reductase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
 
     0.929
AQS00823.1
Potassium-tellurite ethidium and proflavin transporter.
 
     0.817
mobA
Putative molybdenum cofactor guanylyltransferase; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor.
 
   
 0.802
rubR2
Rubredoxin-2.
  
 
 0.732
mmgC_1
acyl-CoA dehydrogenase.
  
 
 0.705
asrC_2
Anaerobic sulfite reductase subunit C; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
 
   
 0.691
asrA
Anaerobic sulfite reductase subunit A.
 
   
 0.684
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.