STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQS00950.1Hypothetical protein. (350 aa)    
Predicted Functional Partners:
AQR99447.1
Hypothetical protein.
 
    0.810
AQS00949.1
Hypothetical protein.
  
    0.738
AQS02141.1
Beta-monoglucosyldiacylglycerol synthase.
  
     0.550
AQR98479.1
Tetratricopeptide repeat protein.
  
     0.501
spoVB_2
Stage V sporulation protein B.
 
     0.456
AQR99516.1
Hypothetical protein; Belongs to the UPF0473 family.
  
     0.444
ywiB
Putative beta-barrel protein YwiB.
  
     0.439
AQS00951.1
Hypothetical protein.
       0.432
AQS02245.1
Hypothetical protein.
  
     0.421
AQS00948.1
Hypothetical protein.
       0.417
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.