STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQS00954.1Hypothetical protein. (346 aa)    
Predicted Functional Partners:
AQR99447.1
Hypothetical protein.
 
    0.812
AQS00953.1
Hypothetical protein.
  
    0.664
AQS02141.1
Beta-monoglucosyldiacylglycerol synthase.
  
     0.555
AQR98479.1
Tetratricopeptide repeat protein.
  
     0.519
spoVB_2
Stage V sporulation protein B.
 
     0.479
AQS00956.1
Tetratricopeptide repeat protein.
 
     0.470
AQR99516.1
Hypothetical protein; Belongs to the UPF0473 family.
  
     0.444
hgdC
Activator of (R)-2-hydroxyglutaryl-CoA dehydratase.
       0.439
lacE_1
Lactose-binding protein precursor.
 
     0.436
ywiB
Putative beta-barrel protein YwiB.
  
     0.428
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.